TFAP2B_1

 

 

 

 

A

C

G

T

 

Name

TFAP2B

1

716

763

180

1520

 

TF group

TFAP

2

672

1006

3179

102

 

Polypeptide used

DBD

3

23

3179

261

23

 

Ligand sequence

TCGTTA20NTTT

4

1

3179

0

34

 

Batch of SELEX experiment

Y

5

11

2054

152

963

 

Seed sequence

NGCCNNNNGGCN

6

209

1199

679

1092

 

Hamming distance of sequences to seed

1

7

1297

815

888

179

 

SELEX cycle

4

8

1274

213

1693

0

 

Number of repeats

dimeric

9

83

17

3179

0

 

Comment

 

10

37

417

3179

12

 

Representative matrix

no

11

92

3179

484

239

 

Source:

 

12

1842

189

670

479

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

TFAP2B_2

 

 

 

 

A

C

G

T

 

Name

TFAP2B

1

1784

1412

232

1121

 

TF group

TFAP

2

36

609

3940

30

 

Polypeptide used

DBD

3

0

4549

4

0

 

Ligand sequence

TCGTTA20NTTT

4

0

4549

1

158

 

Batch of SELEX experiment

Y

5

16

1204

612

2716

 

Seed sequence

NSCCNNNGGSN

6

576

2126

1498

348

 

Hamming distance of sequences to seed

1

7

3480

608

446

14

 

SELEX cycle

4

8

235

4

4549

2

 

Number of repeats

dimeric

9

6

10

4549

1

 

Comment

 

10

47

4250

299

25

 

Representative matrix

no

11

1822

371

1149

1207

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

TFAP2B_3

 

 

 

 

A

C

G

T

 

Name

TFAP2B

1

306

153

95

751

 

TF group

TFAP

2

0

329

1063

0

 

Polypeptide used

DBD

3

0

924

0

0

 

Ligand sequence

TCGTTA20NTTT

4

0

871

0

0

 

Batch of SELEX experiment

Y

5

5

774

22

136

 

Seed sequence

NSCCNNNNNGGSN

6

32

469

132

571

 

Hamming distance of sequences to seed

0

7

147

345

392

384

 

SELEX cycle

4

8

583

200

367

41

 

Number of repeats

dimeric

9

292

53

837

11

 

Comment

 

10

0

0

1236

0

 

Representative matrix

no

11

0

0

1346

0

 

 

 

12

0

897

163

0

 

Source:

 

13

650

106

179

226

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764