TBR1_1

 

 

 

 

A

C

G

T

 

Name

TBR1

1

34509

359

3329

1433

 

TF group

TBX

2

6880

3255

34509

4480

 

Polypeptide used

DBD

3

70

254

34509

213

 

Ligand sequence

TCACAC20NACA

4

39

1759

88

34509

 

Batch of SELEX experiment

Z

5

0

6

34509

4

 

Seed sequence

AGGTGTGANN

6

2386

4742

157

34509

 

Hamming distance of sequences to seed

1

7

1175

2551

34509

7001

 

SELEX cycle

3

8

34509

90

584

205

 

Number of repeats

monomeric

9

25869

2575

1488

4576

 

Comment

 

10

18507

5619

4537

5846

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

TBR1_2

 

 

 

 

A

C

G

T

 

Name

TBR1

1

1957

202

790

434

 

TF group

TBX

2

3383

3

127

54

 

Polypeptide used

full

3

208

22

3383

100

 

Ligand sequence

TTGCAC20NACT

4

0

3

3383

0

 

Batch of SELEX experiment

AE

5

0

46

24

3383

 

Seed sequence

NAGGTGTGAAN

6

0

0

3383

0

 

Hamming distance of sequences to seed

1

7

37

158

17

3383

 

SELEX cycle

4

8

64

99

3383

142

 

Number of repeats

monomeric

9

3383

0

23

20

 

Comment

 

10

3383

100

28

506

 

Representative matrix

no

11

2164

547

163

510

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764