|
|
SHOX |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
SHOX |
|
1 |
4357 |
11134 |
5441 |
8292 |
|
TF group |
homeodomain |
|
2 |
2144 |
14291 |
684 |
14932 |
|
Polypeptide used |
DBD |
|
3 |
29223 |
1248 |
986 |
1412 |
|
Ligand sequence |
TAAGGT20NGGA |
|
4 |
29223 |
346 |
0 |
146 |
|
Batch of SELEX experiment |
AC |
|
5 |
0 |
48 |
0 |
29223 |
|
Seed sequence |
NYAATTAN |
|
6 |
1210 |
1143 |
825 |
29223 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
29223 |
243 |
35 |
1377 |
|
SELEX cycle |
2 |
|
8 |
11002 |
5060 |
9324 |
3837 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|