RARA_1
	A	C	G	T	Name	RARA
1	469	69	142	90	TF group	nuclearreceptor
2	460	15	173	23	Polypeptide used	DBD
3	543	5	107	1	Ligand sequence	TAAAAT20NTA
4	0	2	635	0	Batch of SELEX experiment	Q
5	0	3	628	44	Seed sequence	ARRGGTCANNNRRGGTCA
6	4	5	18	496	Hamming distance of sequences to seed	2
7	8	962	4	16	SELEX cycle	3
8	656	1	17	2	Number of repeats	dimeric
9	138	62	24	334	Comment
10	64	102	153	280	Representative matrix	yes
11	153	78	27	310
12	301	92	302	17
13	384	14	270	1
14	1	1	612	0
15	0	2	557	91
16	9	2	9	497	Source:
17	7	934	14	8	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
18	719	5	24	2
	RARA_2
	A	C	G	T	Name	RARA
1	250	1	513	4	TF group	nuclearreceptor
2	507	1	35	0	Polypeptide used	DBD
3	0	0	745	0	Ligand sequence	TAAAAT20NTA
4	1	0	746	19	Batch of SELEX experiment	Q
5	0	5	1	559	Seed sequence	RAGGTCAAAAGGTCAAKN
6	2	707	26	0	Hamming distance of sequences to seed	2
7	528	0	4	0	SELEX cycle	3
8	526	0	28	162	Number of repeats	dimeric
9	526	0	3	37	Comment
10	522	5	4	0	Representative matrix	yes
11	0	0	759	1
12	0	0	754	101
13	3	0	0	546
14	0	705	0	2
15	540	0	1	0
16	539	36	30	181	Source:
17	2	0	228	328	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
18	0	115	226	212
	RARA_3
	A	C	G	T	Name	RARA
1	1089	24	313	0	TF group	nuclearreceptor
2	0	0	1488	2	Polypeptide used	DBD
3	0	2	1451	71	Ligand sequence	TAAAAT20NTA
4	6	11	17	1143	Batch of SELEX experiment	Q
5	10	1980	9	21	Seed sequence	RGGTCANNNARRGGTCA
6	1391	16	11	2	Hamming distance of sequences to seed	2
7	301	397	84	581	SELEX cycle	3
8	213	432	584	223	Number of repeats	dimeric
9	147	677	157	502	Comment
10	972	118	198	228	Representative matrix	yes
11	1015	17	348	7
12	1126	16	269	1
13	2	0	1455	4
14	1	7	1440	35
15	8	11	13	1131	Source:
16	4	1923	26	22	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
17	1486	3	25	10
	RARA_4
	A	C	G	T	Name	RARA
1	3009	249	574	204	TF group	nuclearreceptor
2	1216	24	1401	0	Polypeptide used	full
3	2	1	2998	1	Ligand sequence	TATAGA20NCG
4	5	0	2729	430	Batch of SELEX experiment	AD
5	147	27	49	2924	Seed sequence	ARGGTCAAAAGGTCA
6	9	4075	20	48	Hamming distance of sequences to seed	2
7	3548	0	92	1	SELEX cycle	3
8	3382	20	70	316	Number of repeats	dimeric
9	3525	25	19	574	Comment
10	3297	5	522	0	Representative matrix	no
11	2	0	2940	1
12	0	2	2812	893
13	21	13	16	3106	Source:
14	2	4029	5	111	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
15	3495	3	1	1
	RARA_5
	A	C	G	T	Name	RARA
1	2187	495	321	691	TF group	nuclearreceptor
2	1769	471	1038	38	Polypeptide used	full
3	1703	23	1073	1	Ligand sequence	TATAGA20NCG
4	0	1	2128	3	Batch of SELEX experiment	AD
5	1	0	2092	31	Seed sequence	ARRGGTCANNNRRGGTCA
6	0	25	13	2448	Hamming distance of sequences to seed	2
7	7	3823	6	12	SELEX cycle	3
8	3120	5	18	0	Number of repeats	dimeric
9	876	632	115	1154	Comment
10	233	749	1429	172	Representative matrix	no
11	402	693	327	1197
12	691	52	1408	64
13	2036	49	709	0
14	1	1	2084	2
15	1	2	2084	55
16	13	10	47	2412	Source:
17	2	3826	2	16	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
18	2990	7	72	0
	RARA_6
	A	C	G	T	Name	RARA
1	4701	39	800	5	TF group	nuclearreceptor
2	1	4	4339	4	Polypeptide used	full
3	0	2	4008	461	Ligand sequence	TATAGA20NCG
4	18	20	55	4881	Batch of SELEX experiment	AD
5	8	7169	71	23	Seed sequence	RGGTCANNNARRGGTCA
6	5979	7	52	0	Hamming distance of sequences to seed	2
7	3316	605	480	1102	SELEX cycle	3
8	806	1707	1685	662	Number of repeats	dimeric
9	658	1247	1086	1736	Comment
10	4267	343	379	924	Representative matrix	no
11	2890	110	2448	52
12	4784	27	834	0
13	2	1	4252	0
14	2	7	4259	69
15	21	62	29	4849	Source:
16	63	7209	18	31	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
17	5808	8	29	2
	Rara_7
	A	C	G	T	Name	Rara
1	145	28	9	17	TF group	nuclearreceptor
2	134	3	40	3	Polypeptide used	DBD
3	161	2	23	0	Ligand sequence	TCGGTT20NCG
4	1	0	236	0	Batch of SELEX experiment	P
5	0	0	230	9	Seed sequence	ARRGGTCANNNRRGGTCA
6	0	0	3	203	Hamming distance of sequences to seed	2
7	0	193	0	3	SELEX cycle	4
8	195	1	3	1	Number of repeats	dimeric
9	68	52	12	60	Comment
10	23	58	82	43	Representative matrix	no
11	83	38	74	17
12	71	3	129	5
13	141	1	38	0
14	1	0	219	0
15	1	0	202	12
16	1	0	4	189	Source:
17	0	207	4	1	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
18	177	1	0	0
	Rara_8
	A	C	G	T	Name	Rara
1	237	0	30	1	TF group	nuclearreceptor
2	2	2	236	2	Polypeptide used	DBD
3	1	3	206	47	Ligand sequence	TCGGTT20NCG
4	1	1	7	252	Batch of SELEX experiment	P
5	0	354	2	3	Seed sequence	RGGTCANNNARRGGTCA
6	314	0	0	1	Hamming distance of sequences to seed	2
7	81	138	17	49	SELEX cycle	4
8	37	73	72	83	Number of repeats	dimeric
9	60	107	18	93	Comment
10	222	15	18	46	Representative matrix	no
11	213	3	57	4
12	252	3	25	0
13	0	1	221	0
14	0	1	193	30
15	0	1	0	234	Source:
16	1	387	0	3	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
17	281	0	5	0
	Rara_9
	A	C	G	T	Name	Rara
1	602	43	394	24	TF group	nuclearreceptor
2	830	7	152	0	Polypeptide used	DBD
3	0	0	1231	2	Ligand sequence	TCGGTT20NCG
4	1	0	1131	97	Batch of SELEX experiment	P
5	4	4	7	1070	Seed sequence	RRGGTCAAAAGGTCA
6	0	1071	6	3	Hamming distance of sequences to seed	2
7	1047	0	3	1	SELEX cycle	4
8	1041	3	5	20	Number of repeats	dimeric
9	998	1	51	35	Comment
10	996	2	65	1	Representative matrix	no
11	1	0	1156	0
12	0	1	1016	176
13	1	3	15	1007	Source:
14	1	1103	7	7	Jolma et al., Cell 152:327-339 (2013); PubMed 23332764
15	1010	0	0	2