|
|
POU3F1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU3F1 |
|
1 |
1034 |
126 |
322 |
1437 |
|
TF group |
POU |
|
2 |
505 |
186 |
128 |
2471 |
|
Polypeptide used |
DBD |
|
3 |
2471 |
7 |
26 |
21 |
|
Ligand sequence |
TAGCGA20NGCT |
|
4 |
44 |
53 |
21 |
2471 |
|
Batch of SELEX experiment |
Y |
|
5 |
37 |
13 |
2471 |
232 |
|
Seed sequence |
WTATGCWAATNW |
|
6 |
170 |
2471 |
413 |
1119 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
1423 |
1 |
21 |
1048 |
|
SELEX cycle |
2 |
|
8 |
2471 |
103 |
130 |
284 |
|
Number of repeats |
monomeric |
|
9 |
2471 |
20 |
25 |
63 |
|
Comment |
|
|
10 |
259 |
95 |
128 |
2471 |
|
Representative matrix |
no |
|
11 |
382 |
302 |
620 |
1167 |
|
Source: |
|
|
12 |
1510 |
478 |
452 |
961 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
POU3F1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
POU3F1 |
|
1 |
1413 |
316 |
238 |
731 |
|
TF group |
POU |
|
2 |
399 |
212 |
122 |
2143 |
|
Polypeptide used |
DBD |
|
3 |
593 |
148 |
2143 |
206 |
|
Ligand sequence |
TAGCGA20NGCT |
|
4 |
966 |
1177 |
12 |
156 |
|
Batch of SELEX experiment |
Y |
|
5 |
2143 |
64 |
40 |
97 |
|
Seed sequence |
WTGMATAAWTNA |
|
6 |
26 |
12 |
4 |
2143 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
2143 |
68 |
100 |
617 |
|
SELEX cycle |
2 |
|
8 |
2143 |
223 |
78 |
617 |
|
Number of repeats |
monomeric |
|
9 |
841 |
116 |
81 |
1302 |
|
Comment |
|
|
10 |
515 |
252 |
587 |
2143 |
|
Representative
matrix |
yes |
|
11 |
584 |
472 |
148 |
939 |
|
Source: |
|
|
12 |
2143 |
239 |
269 |
459 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|