|
|
PAX5 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
PAX5 |
|
1 |
400 |
1223 |
962 |
544 |
|
TF group |
PAX |
|
2 |
61 |
39 |
2973 |
433 |
|
Polypeptide used |
DBD |
|
3 |
469 |
320 |
76 |
2815 |
|
Ligand sequence |
TACAGG20NGAC |
|
4 |
103 |
3005 |
21 |
1045 |
|
Batch of SELEX experiment |
Y |
|
5 |
3249 |
256 |
171 |
120 |
|
Seed sequence |
NGTCACGCWTSRNTGNNY |
|
6 |
45 |
3206 |
16 |
741 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
242 |
21 |
2971 |
5 |
|
SELEX cycle |
3 |
|
8 |
13 |
3036 |
1258 |
18 |
|
Number of repeats |
monomeric |
|
9 |
1580 |
300 |
249 |
1273 |
|
Comment |
|
|
10 |
82 |
848 |
5 |
2637 |
|
Representative
matrix |
no |
|
11 |
22 |
1432 |
1803 |
109 |
|
|
|
|
12 |
2228 |
21 |
1025 |
7 |
|
|
|
|
13 |
678 |
849 |
901 |
683 |
|
|
|
|
14 |
122 |
646 |
110 |
2553 |
|
|
|
|
15 |
1106 |
39 |
2849 |
207 |
|
|
|
|
16 |
1050 |
1521 |
760 |
27 |
|
Source: |
|
|
17 |
786 |
511 |
813 |
895 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
18 |
96 |
1589 |
210 |
1337 |
|
|
|