PAX4_1

 

 

 

 

A

C

G

T

 

Name

PAX4

1

272

920

208

428

 

TF group

PAX

2

166

57

351

920

 

Polypeptide used

DBD

3

920

30

9

15

 

Ligand sequence

TATTTA20NTTG

4

920

3

6

0

 

Batch of SELEX experiment

Y

5

7

7

0

920

 

Seed sequence

CTAATTAG

6

18

17

42

920

 

Hamming distance of sequences to seed

1

7

920

164

62

91

 

SELEX cycle

4

8

596

220

920

148

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

PAX4_2

 

 

 

 

A

C

G

T

 

Name

PAX4

1

37

333

47

105

 

TF group

PAX

2

58

30

120

333

 

Polypeptide used

full

3

333

2

0

3

 

Ligand sequence

TCGCAT20NACT

4

333

0

0

0

 

Batch of SELEX experiment

W

5

0

0

5

333

 

Seed sequence

CTAATTAG

6

18

11

10

333

 

Hamming distance of sequences to seed

1

7

333

89

11

12

 

SELEX cycle

4

8

150

93

333

41

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764