NR2F6_1

 

 

 

 

A

C

G

T

 

Name

NR2F6

1

1792

254

1852

183

 

TF group

nuclearreceptor

2

1968

7

1525

2

 

Polypeptide used

DBD

3

2

0

3314

15

 

Ligand sequence

TGTGGA20NGA

4

4

1

3325

17

 

Batch of SELEX experiment

Y

5

1

2

10

3412

 

Seed sequence

RRGGTCAAAAGGTCA

6

1

4937

8

112

 

Hamming distance of sequences to seed

2

7

4034

5

31

15

 

SELEX cycle

3

8

3365

145

148

513

 

Number of repeats

dimeric

9

3071

39

601

609

 

Comment

 

10

4103

1

184

0

 

Representative matrix

no

11

3

0

3251

0

 

 

 

12

3

0

3244

24

 

 

 

13

0

2

30

3331

 

Source:

 

14

4

4931

20

120

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

15

3819

2

304

6

 

 

 

 

 

 

 

 

 

 

 

 

NR2F6_2

 

 

 

 

A

C

G

T

 

Name

NR2F6

1

4381

1100

5303

891

 

TF group

nuclearreceptor

2

8329

33

3734

5

 

Polypeptide used

DBD

3

10

1

10418

95

 

Ligand sequence

TGTGGA20NGA

4

15

3

10366

130

 

Batch of SELEX experiment

Y

5

1

42

79

11035

 

Seed sequence

RRGGTCAAAGGTCA

6

73

15733

112

852

 

Hamming distance of sequences to seed

2

7

13750

0

40

1

 

SELEX cycle

3

8

13074

35

470

272

 

Number of repeats

dimeric

9

13254

0

502

2

 

Comment

 

10

5

3

10283

14

 

Representative matrix

no

11

27

3

10049

235

 

 

 

12

1

39

78

10827

 

Source:

 

13

6

16374

149

539

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

12817

87

1276

24

 

 

 

 

 

 

 

 

 

 

 

 

NR2F6_3

 

 

 

 

A

C

G

T

 

Name

NR2F6

1

152

68

163

55

 

TF group

nuclearreceptor

2

216

11

158

6

 

Polypeptide used

full

3

10

7

312

21

 

Ligand sequence

TCTTGA20NGA

4

11

8

305

24

 

Batch of SELEX experiment

AE

5

6

18

25

385

 

Seed sequence

RRGGTCAAAGGTCA

6

11

523

18

56

 

Hamming distance of sequences to seed

2

7

454

6

8

8

 

SELEX cycle

3

8

425

11

42

35

 

Number of repeats

dimeric

9

450

2

35

0

 

Comment

 

10

2

2

320

5

 

Representative matrix

no

11

4

1

314

16

 

 

 

12

2

10

15

419

 

Source:

 

13

1

614

21

59

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

449

7

44

7

 

 

 

 

 

 

 

 

 

 

 

 

Nr2f6_4

 

 

 

 

A

C

G

T

 

Name

Nr2f6

1

100

16

172

0

 

TF group

nuclearreceptor

2

265

0

53

3

 

Polypeptide used

DBD

3

0

0

210

0

 

Ligand sequence

TAGTTT20NCG

4

1

0

183

0

 

Batch of SELEX experiment

Z

5

0

0

1

378

 

Seed sequence

RRGGTCAAAAGGTCA

6

0

667

1

51

 

Hamming distance of sequences to seed

2

7

494

30

0

1

 

SELEX cycle

4

8

406

4

7

9

 

Number of repeats

dimeric

9

165

0

94

59

 

Comment

 

10

258

0

0

0

 

Representative matrix

no

11

0

0

324

0

 

 

 

12

0

0

155

5

 

 

 

13

2

0

0

369

 

Source:

 

14

0

678

0

3

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

15

446

0

9

0

 

 

 

 

 

 

 

 

 

 

 

 

Nr2f6_5

 

 

 

 

A

C

G

T

 

Name

Nr2f6

1

880

58

1152

206

 

TF group

nuclearreceptor

2

1668

0

569

1

 

Polypeptide used

DBD

3

6

0

2459

76

 

Ligand sequence

TAGTTT20NCG

4

1

0

2287

60

 

Batch of SELEX experiment

Z

5

0

13

2

2147

 

Seed sequence

RRGGTCAAAGGTCA

6

67

2935

0

385

 

Hamming distance of sequences to seed

2

7

2166

0

0

8

 

SELEX cycle

4

8

2552

2

12

38

 

Number of repeats

dimeric

9

2736

0

36

1

 

Comment

 

10

0

0

3021

12

 

Representative matrix

no

11

0

0

2918

70

 

 

 

12

0

10

8

2419

 

Source:

 

13

0

2813

50

186

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

1774

3

139

10