NHLH1_1

 

 

 

 

A

C

G

T

 

Name

NHLH1

1

30

189

14

11

 

TF group

bHLH

2

34

36

189

12

 

Polypeptide used

DBD

3

4

189

0

0

 

Ligand sequence

TGGGCG20NGA

4

189

1

3

0

 

Batch of SELEX experiment

W

5

0

38

189

19

 

Seed sequence

CGCAGCTGCG

6

5

189

1

1

 

Hamming distance of sequences to seed

1

7

4

0

0

189

 

SELEX cycle

4

8

2

0

189

0

 

Number of repeats

dimeric

9

0

189

0

0

 

Comment

 

10

32

98

189

67

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

NHLH1_2

 

 

 

 

A

C

G

T

 

Name

NHLH1

1

788

2166

181

111

 

TF group

bHLH

2

461

179

2166

142

 

Polypeptide used

full

3

3

2166

0

0

 

Ligand sequence

TGATGG20NGTA

4

2166

3

1

0

 

Batch of SELEX experiment

W

5

0

301

2166

114

 

Seed sequence

CGCAGCTGCG

6

96

2166

124

0

 

Hamming distance of sequences to seed

1

7

0

4

4

2166

 

SELEX cycle

4

8

2

4

2166

1

 

Number of repeats

dimeric

9

296

2166

102

350

 

Comment

 

10

308

736

2166

1489

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764