MAX_dd1

 

 

 

 

A

C

G

T

 

Name

MAX

1

44

2459

1

2

 

TF group

bHLH

2

2459

11

55

32

 

Polypeptide used

DBD

3

5

2459

12

142

 

Ligand sequence

TGACCT20NGA

4

198

12

2459

1

 

Batch of SELEX experiment

Y

5

40

134

1

2459

 

Seed sequence

CACGTGNNNNNCACGTG

6

7

5

2459

30

 

Hamming distance of sequences to seed

1

7

331

948

720

459

 

SELEX cycle

3

8

549

779

307

822

 

Number of repeats

dimer of dimers

9

890

762

373

432

 

Comment

 

10

994

533

537

395

 

Representative matrix

yes

11

792

802

539

326

 

 

 

12

22

2459

4

2

 

 

 

13

2459

5

59

30

 

 

 

14

2

2459

5

109

 

 

 

15

303

24

2459

4

 

Source:

 

16

124

185

12

2459

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

17

4

2

2459

54

 

 

 

 

 

 

 

 

 

 

 

 

MAX_d1

 

 

 

 

A

C

G

T

 

Name

MAX

1

3307

1556

1295

719

 

TF group

bHLH

2

1915

2809

1514

637

 

Polypeptide used

DBD

3

39

6876

0

0

 

Ligand sequence

TGACCT20NGA

4

6876

0

87

38

 

Batch of SELEX experiment

Y

5

0

6876

7

229

 

Seed sequence

NNCACGTGNN

6

329

39

6876

19

 

Hamming distance of sequences to seed

1

7

69

159

20

6876

 

SELEX cycle

2

8

0

27

6876

36

 

Number of repeats

dimeric

9

1341

2450

1638

1446

 

Comment

 

10

1122

2225

986

2543

 

Representative matrix

yes

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764