|
|
GSX2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
GSX2 |
|
1 |
2836 |
2469 |
2083 |
2121 |
|
TF group |
homeodomain |
|
2 |
1543 |
3895 |
2235 |
1835 |
|
Polypeptide used |
DBD |
|
3 |
1147 |
4131 |
520 |
5377 |
|
Ligand sequence |
TCCAAC20NCG |
|
4 |
6175 |
3332 |
504 |
1446 |
|
Batch of SELEX experiment |
Y |
|
5 |
9508 |
458 |
640 |
712 |
|
Seed sequence |
NNYMATTANN |
|
6 |
663 |
344 |
0 |
9508 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
840 |
811 |
130 |
9508 |
|
SELEX cycle |
3 |
|
8 |
9508 |
298 |
155 |
796 |
|
Number of repeats |
monomeric |
|
9 |
4398 |
1642 |
2235 |
1233 |
|
Comment |
|
|
10 |
3588 |
2288 |
1535 |
2097 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|