FOXO6_d1

 

 

 

 

A

C

G

T

 

Name

FOXO6

1

274

7

1281

18

 

TF group

forkhead

2

65

48

34

1402

 

Polypeptide used

DBD

3

770

141

10

35

 

Ligand sequence

TCGTGT30NGTT

4

819

42

9

26

 

Batch of SELEX experiment

AH

5

810

0

23

10

 

Seed sequence

GTAAACATGTTTAC

6

3

996

1

33

 

Hamming distance of sequences to seed

2

7

808

6

11

41

 

SELEX cycle

4

8

6

2

0

1380

 

Number of repeats

dimeric

9

37

3

1523

3

 

Comment

 

10

0

0

2

1419

 

Representative matrix

no

11

16

15

34

1398

 

 

 

12

23

4

397

1315

 

Source:

 

13

785

0

44

70

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

0

869

20

270

 

 

 

 

 

 

 

 

 

 

 

 

FOXO6_m1

 

 

 

 

A

C

G

T

 

Name

FOXO6

1

1445

0

7025

0

 

TF group

forkhead

2

154

0

32

7025

 

Polypeptide used

DBD

3

7025

1147

7

0

 

Ligand sequence

TCGTGT30NGTT

4

7025

195

0

26

 

Batch of SELEX experiment

AH

5

7025

0

0

0

 

Seed sequence

GTAAACA

6

0

7025

31

385

 

Hamming distance of sequences to seed

1

7

7025

0

13

0

 

SELEX cycle

3

 

 

 

 

 

 

Number of repeats

monomeric

 

 

 

 

 

 

Comment

 

 

 

 

 

 

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

FOXO6_1

 

 

 

 

A

C

G

T

 

Name

FOXO6

1

150

123

185

1069

 

TF group

forkhead

2

158

57

52

1262

 

Polypeptide used

DBD

3

22

32

36

1353

 

Ligand sequence

TCGTGT30NGTT

4

2

947

3

13

 

Batch of SELEX experiment

AH

5

0

975

4

6

 

Seed sequence

TTTCCCCACACRAC

6

4

975

4

0

 

Hamming distance of sequences to seed

2

7

6

985

3

17

 

SELEX cycle

4

8

807

1

0

2

 

Number of repeats

putatively multimeric

9

0

980

1

1

 

Comment

 

10

808

4

9

0

 

Representative matrix

no

11

52

932

14

17

 

 

 

12

172

52

1076

56

 

Source:

 

13

708

225

74

130

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

96

877

131

81