|
|
ESX1_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ESX1 |
|
1 |
9447 |
9120 |
8027 |
6094 |
|
TF group |
homeodomain |
|
2 |
5294 |
13992 |
6238 |
7164 |
|
Polypeptide used |
DBD |
|
3 |
2157 |
17588 |
523 |
15100 |
|
Ligand sequence |
TCTCGG20NGA |
|
4 |
32688 |
3042 |
3258 |
2341 |
|
Batch of SELEX experiment |
AC |
|
5 |
32688 |
2436 |
446 |
847 |
|
Seed sequence |
NNYAATTANN |
|
6 |
342 |
865 |
80 |
32688 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
3097 |
5404 |
2040 |
32688 |
|
SELEX cycle |
2 |
|
8 |
32688 |
653 |
343 |
2270 |
|
Number of repeats |
monomeric |
|
9 |
9415 |
8488 |
8969 |
5816 |
|
Comment |
|
|
10 |
6375 |
13552 |
6389 |
6372 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
ESX1_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ESX1 |
|
1 |
10665 |
8153 |
9485 |
7321 |
|
TF group |
homeodomain |
|
2 |
6473 |
15223 |
5362 |
8564 |
|
Polypeptide used |
full |
|
3 |
2884 |
17981 |
472 |
17642 |
|
Ligand sequence |
TCTTCT20NGA |
|
4 |
35623 |
3018 |
3416 |
2400 |
|
Batch of SELEX experiment |
AE |
|
5 |
35623 |
2440 |
867 |
1089 |
|
Seed sequence |
NNYAATTANN |
|
6 |
756 |
995 |
4 |
35623 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
3721 |
4545 |
1274 |
35623 |
|
SELEX cycle |
2 |
|
8 |
35623 |
477 |
449 |
2501 |
|
Number of repeats |
monomeric |
|
9 |
12065 |
7659 |
10210 |
5689 |
|
Comment |
|
|
10 |
7586 |
14583 |
6231 |
7223 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|