|
|
EOMES_m1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
EOMES |
|
1 |
4526 |
911 |
2274 |
2122 |
|
TF group |
TBX |
|
2 |
9832 |
158 |
1259 |
653 |
|
Polypeptide used |
DBD |
|
3 |
1775 |
1004 |
9832 |
1305 |
|
Ligand sequence |
TGTAAA30NAAG |
|
4 |
23 |
92 |
9832 |
94 |
|
Batch of SELEX experiment |
AI |
|
5 |
19 |
600 |
50 |
9832 |
|
Seed sequence |
NAGGTGTGAAAWN |
|
6 |
9 |
8 |
9832 |
3 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
495 |
1540 |
98 |
9832 |
|
SELEX cycle |
3 |
|
8 |
210 |
550 |
9832 |
980 |
|
Number of repeats |
monomeric |
|
9 |
9832 |
28 |
99 |
24 |
|
Comment |
|
|
10 |
9832 |
1956 |
1022 |
3351 |
|
Representative matrix |
yes |
|
11 |
9832 |
4337 |
2941 |
3781 |
|
|
|
|
12 |
5649 |
1960 |
1966 |
4183 |
|
Source: |
|
|
13 |
2501 |
2577 |
1954 |
2800 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
EOMES_d1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
EOMES |
|
1 |
103 |
154 |
67 |
2950 |
|
TF group |
TBX |
|
2 |
980 |
2147 |
615 |
177 |
|
Polypeptide used |
DBD |
|
3 |
2071 |
39 |
566 |
198 |
|
Ligand sequence |
TGTAAA30NAAG |
|
4 |
1 |
2467 |
6 |
18 |
|
Batch of SELEX experiment |
AI |
|
5 |
2155 |
28 |
344 |
2 |
|
Seed sequence |
TCACACCTNNNNAGGTGTGA |
|
6 |
88 |
2419 |
99 |
41 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
540 |
2160 |
628 |
633 |
|
SELEX cycle |
3 |
|
8 |
425 |
674 |
203 |
2723 |
|
Number of repeats |
dimeric |
|
9 |
720 |
476 |
449 |
1002 |
|
Comment |
|
|
10 |
588 |
769 |
672 |
624 |
|
Representative matrix |
yes |
|
11 |
661 |
552 |
711 |
744 |
|
|
|
|
12 |
977 |
249 |
814 |
576 |
|
|
|
|
13 |
2078 |
165 |
547 |
366 |
|
|
|
|
14 |
730 |
709 |
2631 |
714 |
|
|
|
|
15 |
75 |
139 |
3026 |
128 |
|
|
|
|
16 |
26 |
730 |
73 |
2682 |
|
|
|
|
17 |
5 |
13 |
3029 |
3 |
|
|
|
|
18 |
303 |
778 |
81 |
2783 |
|
Source: |
|
|
19 |
190 |
377 |
2839 |
658 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
20 |
2257 |
30 |
130 |
56 |
|
|
|