|
|
DUXA |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
DUXA |
|
1 |
224 |
313 |
194 |
283 |
|
TF group |
homeodomain |
|
2 |
241 |
285 |
111 |
1014 |
|
Polypeptide used |
DBD |
|
3 |
655 |
5 |
359 |
12 |
|
Ligand sequence |
TTCACA20NTA |
|
4 |
1014 |
6 |
11 |
5 |
|
Batch of SELEX experiment |
AF |
|
5 |
136 |
394 |
125 |
620 |
|
Seed sequence |
NTRAYNTAATCAN |
|
6 |
12 |
392 |
193 |
417 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
23 |
344 |
116 |
1014 |
|
SELEX cycle |
2 |
|
8 |
1014 |
56 |
47 |
22 |
|
Number of repeats |
dimeric |
|
9 |
1014 |
7 |
10 |
7 |
|
Comment |
|
|
10 |
0 |
1 |
5 |
1014 |
|
Representative matrix |
yes |
|
11 |
0 |
1014 |
3 |
108 |
|
|
|
|
12 |
1014 |
29 |
52 |
92 |
|
Source: |
|
|
13 |
364 |
178 |
283 |
189 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|