|
|
CREB3_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
CREB3 |
|
1 |
18 |
40 |
20 |
36 |
|
TF group |
bZIP |
|
2 |
28 |
25 |
38 |
22 |
|
Polypeptide used |
full |
|
3 |
57 |
5 |
57 |
1 |
|
Ligand sequence |
TAGAAC20NCG |
|
4 |
0 |
0 |
0 |
114 |
|
Batch of SELEX experiment |
AD |
|
5 |
0 |
1 |
114 |
3 |
|
Seed sequence |
NNRTGACGTCAYCN |
|
6 |
114 |
0 |
0 |
1 |
|
Hamming distance of sequences to seed |
1 |
|
7 |
0 |
114 |
0 |
1 |
|
SELEX cycle |
4 |
|
8 |
0 |
0 |
114 |
1 |
|
Number of repeats |
dimeric |
|
9 |
0 |
1 |
0 |
114 |
|
Comment |
|
|
10 |
0 |
114 |
1 |
0 |
|
Representative matrix |
no |
|
11 |
114 |
1 |
1 |
1 |
|
|
|
|
12 |
1 |
53 |
6 |
61 |
|
Source: |
|
|
13 |
11 |
114 |
5 |
8 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
57 |
29 |
20 |
8 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
CREB3_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
CREB3 |
|
1 |
79 |
78 |
107 |
50 |
|
TF group |
bZIP |
|
2 |
32 |
78 |
75 |
284 |
|
Polypeptide used |
full |
|
3 |
20 |
0 |
390 |
129 |
|
Ligand sequence |
TAGAAC20NCG |
|
4 |
92 |
207 |
2 |
20 |
|
Batch of SELEX experiment |
AD |
|
5 |
7 |
241 |
16 |
7 |
|
Seed sequence |
NTGCCACGTCAYCN |
|
6 |
305 |
0 |
0 |
1 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
0 |
245 |
0 |
0 |
|
SELEX cycle |
4 |
|
8 |
3 |
0 |
447 |
2 |
|
Number of repeats |
dimeric |
|
9 |
1 |
1 |
0 |
376 |
|
Comment |
|
|
10 |
10 |
245 |
8 |
4 |
|
Representative matrix |
yes |
|
11 |
300 |
2 |
12 |
6 |
|
|
|
|
12 |
7 |
115 |
28 |
161 |
|
Source: |
|
|
13 |
65 |
210 |
35 |
59 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
119 |
50 |
98 |
43 |
|
|
|