|
ATF7 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
ATF7 |
1 |
3922 |
6606 |
4161 |
4641 |
|
TF group |
bZIP |
2 |
5130 |
2440 |
7299 |
4461 |
|
Polypeptide used |
DBD |
3 |
19329 |
368 |
3772 |
41 |
|
Ligand sequence |
TGGGCG30NCGT |
4 |
11 |
4 |
43 |
19329 |
|
Batch of SELEX experiment |
AI |
5 |
26 |
7 |
19329 |
1759 |
|
Seed sequence |
NNATGACGTCATNN |
6 |
19329 |
8 |
58 |
12 |
|
Hamming distance of sequences to seed |
1 |
7 |
20 |
19329 |
33 |
68 |
|
SELEX cycle |
4 |
8 |
79 |
9 |
19329 |
4 |
|
Number of repeats |
dimeric |
9 |
25 |
16 |
77 |
19329 |
|
Comment |
|
10 |
2698 |
19329 |
51 |
22 |
|
Representative matrix |
yes |
11 |
19329 |
2 |
49 |
11 |
|
|
|
12 |
82 |
7305 |
440 |
19329 |
|
Source: |
|
13 |
5628 |
8116 |
2129 |
3456 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
14 |
5680 |
4920 |
5892 |
2839 |
|
|
|